Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015955162.1_cds_XP_016493771.1_83847
CDS Infomation

[gene=LOC107813076] [db_xref=GeneID:107813076] [protein=protein SCAI-like] [protein_id=XP_016493771.1] [location=complement(join(11878..12058,12160..12296,12374..12553,13363..13454,13562..13753,13851..13917,14387..14629,14712..14918,17411..17899))] [gbkey=CDS]
Sequence

ATGGCAGACGACGTAGTTCCGAAGACATTTAGAGCGTTAGTAGAAAGTGCTGAGAAGAAG
TACGCCAGAGTACGGGATTTGCCGGCGTACGGACGGTGGGGAACGAGCAACCATTACTTT
CACAAGGTGTTTAAAGCGTACATGAGGTTATGGAAGTACCAGCAGGAGAATCGAGCGAAG
CTAACGGACTGCGGGTTACAACGATGGGAGATCGGCGAGATCGCTTCGAGAATCGGTCAG
CTTTATTTCAGTCAGTACATGAGGACTAGCGAAGTTAGGTTTTTACTCGAATCATATATT
TTTTACGAAGCGATTTTGCACAGGAAGTATTTCGAAGGTTCTGGAAAAGAACGAATGGTG
AGGTTTAAAGAGCTGAGGTTCTATGCTAGGTTTTTAATGGTTTCGTTGATTTTAAATCGA
TCGGAAATGGTGAAACTGCTTGTGGAACAATTTAAAGCTATTGTTGATGACAGTAGAGCT
GCTTTTCCGGGTACTAACTTCAAAGAGTGGAGACTGGTGGTGCAAGAAATTGTTAGGTTT
ACAAGAGTTGATTCTCCATCTCCAGATGCCAGGCCTCTTAGATATTGTGCTCTCTTTGAT
TCACATCCGTCATCTCGTCCATATGTAGCTCGCTTCCATGCTAAGAAGGTGCTAAAGTTT
CGAGATGCACTTCTGACAAGTTATCACAAAAGTGAGGTCAAATTTGCAGAATTAACACTG
GACACTTACAGAATGCTGCAATGTTTGGAATGGGAACCCAGTGGATCTTTCTATCAAAGA
AGTCCAGTTGAACCACGAGAGAATGGTGCTGTTACCGACCAATCTGTAACTTCTGGACTT
ATAGACATAAACTTGGCTGCTGAGATGATGGATCCAGCTTTGCCTCCAAATCCCAAGAAG
GCTGTTCTTTACCGTCCTTCTGTTCCGCTATTGATATCTGTTGTTGCTACAATGTGTGAG
GAGCTTCCTCCAGAGTGTGTGGTATTAATATATATTTCTGCATCAGGAAATACAAATCAC
AGTACCGCCTCTCACATGGAAAGCTCTTCAAGTTCTAGAAAATCTTCAAAGAACAATGCT
CTTTCTCGTACTTCTTATGAACAGAAGAGTGCTTTACATGAAAATTATACCAACACCAAT
GGAGATATGGGTCAATATTTTGAGAATTGTTTGTGCTTAGGTCCTAGCAGAAGTGGAGGT
TCAAATAACCTCTATCCAGGAGATCTAATTCCTTTCACACGAAGACCTCTATTCCTGATA
ATTGATAGTGAAAACAGCCATGCATTCAAGGTTCTACATGGTGCAGAAAGAGGAGAAAAA
AGTGCTTTATTTCTCTCTCCCCTGAGGCCATCATTCAAGAACTCAGGTACTGATGTAACA
CAATCTGGAAGTCAGTTCACCTTGTTCTTGGCTGCTCCCTTACAGGCCTTCTGCCAGTTG
GTTGGCCTTGTCTCTTCTGATAAGGATATGGATTGTTTTGATGAGGCTGATGGCATCATC
TCAACTGCATTTGCAGAGTGGGAAGTAAACCTCTGTACATCGACTAGCCTAGATTTGGTT
TGGGCTCAAGTTCTTTCTGATCCATTTCTGAGACGGCTTATTCTCAGATTCATATTCTGC
CGTGCTGTGCTCGCTCTATTTTGCTTGCAGGAACGTGAAGATCAGTATTTGCCTGCTTGT
TTACCAAAGCTTCCTGATACATTCTCCCCAAACTCTGAAACTGTGCAATCAGCTATCAGA
CGACTTGCAAAGCTTCTACGAGTATCAGATTGTTTTCGATTCGAATAA

Peptide Sequence

PEP ID

XP_016493771.1
PEP Infomation

PREDICTED: protein SCAI-like [Nicotiana tabacum]
Sequence

MADDVVPKTFRALVESAEKKYARVRDLPAYGRWGTSNHYFHKVFKAYMRLWKYQQENRAK
LTDCGLQRWEIGEIASRIGQLYFSQYMRTSEVRFLLESYIFYEAILHRKYFEGSGKERMV
RFKELRFYARFLMVSLILNRSEMVKLLVEQFKAIVDDSRAAFPGTNFKEWRLVVQEIVRF
TRVDSPSPDARPLRYCALFDSHPSSRPYVARFHAKKVLKFRDALLTSYHKSEVKFAELTL
DTYRMLQCLEWEPSGSFYQRSPVEPRENGAVTDQSVTSGLIDINLAAEMMDPALPPNPKK
AVLYRPSVPLLISVVATMCEELPPECVVLIYISASGNTNHSTASHMESSSSSRKSSKNNA
LSRTSYEQKSALHENYTNTNGDMGQYFENCLCLGPSRSGGSNNLYPGDLIPFTRRPLFLI
IDSENSHAFKVLHGAERGEKSALFLSPLRPSFKNSGTDVTQSGSQFTLFLAAPLQAFCQL
VGLVSSDKDMDCFDEADGIISTAFAEWEVNLCTSTSLDLVWAQVLSDPFLRRLILRFIFC
RAVLALFCLQEREDQYLPACLPKLPDTFSPNSETVQSAIRRLAKLLRVSDCFRFE

Transcript Sequence

Gene sequence data has not been registered.